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Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe

I absolutely love sharing this Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe with you because it’s one of those cozy, feel-good treats that everyone can enjoy—even if you’re not vegan. The blend of warm spices, rich dark chocolate, and zingy candied ginger creates a cookie that’s bursting with flavor and perfect for chilly afternoons or holiday celebrations. When I first tried making thumbprint cookies vegan, I was amazed at how well the flavors melded together, and honestly, these cookies always disappear faster than I can bake them!

You’ll find that this Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe is not only delicious but practical too. It works well for gifting, cookie swaps, or that moment when you want a special treat without fussing over complicated steps or rare ingredients. Plus, making your own candied ginger is a game-changer—you get that sweet-spicy kick in every bite. Trust me, once you try this, it’ll be your go-to cookie recipe for the season.

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Why You’ll Love This Recipe

  • Vegan-Friendly & Delicious: You get all the spice and chocolate indulgence without any animal products.
  • Perfect Texture: The thumbprint centers stay soft with luscious chocolate ganache while the cookie itself has a tender crumb.
  • Homemade Candied Ginger: Adding your own candied ginger adds a fresh zing and personal touch that’s hard to beat.
  • Great for All Occasions: Whether it’s a festive gathering or afternoon coffee, these cookies brighten any moment.

Ingredients You’ll Need

Choosing the right ingredients is key to nailing this Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe. I like using store-bought oat flour for convenience, but making your own is also easy if you have rolled oats. And don’t skip the blackstrap molasses—that’s where a lot of that classic gingerbread magic comes from!

  • Coconut sugar: Offers subtle caramel notes that balance spices, plus it’s less refined than white sugar.
  • Fresh ginger root: Essential for that fresh zing in your candied ginger slices.
  • Oat flour: Gives the cookies a tender texture and mild flavor that pairs beautifully with spices.
  • Almond flour: Adds a bit of richness and helps with moisture.
  • Baking powder: Ensures your cookies get just enough lift and don’t turn out too dense.
  • Ground cinnamon, ginger, nutmeg, and cloves: The signature gingerbread spices—feel free to adjust to your taste!
  • Kosher salt: Balances sweetness and enhances all the flavors.
  • Refined coconut oil: I use refined to avoid coconut flavor but keep that great fat content for softness.
  • Blackstrap molasses: Deep and robust, this gives the classic gingerbread richness.
  • Dark chocolate (70% or more): I prefer Hu Simple Dark Chocolate for its clean ingredients and deep flavor.
  • Unsweetened coconut cream: Makes the ganache silky smooth and vegan-friendly.
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Note: You’ll find the complete list of ingredients, along with their exact measurements, in the printable recipe card at the bottom of this post.

Variations

I love how flexible this Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe can be. Over time, I’ve played around with different spice blends and fillings to make the recipe my own. Feel free to experiment and find what combo makes you happiest!

  • Spice Swap: Sometimes I add a pinch of cardamom or allspice to deepen the flavor complexity. It’s such a fun twist!
  • Nut-Free Option: Use sunflower seed flour instead of almond flour if you need a nut-free version, and the texture stays just as lovely.
  • Jam-Filled Variation: Instead of chocolate ganache, spread your favorite vegan jam in the thumbprints. Raspberry or apricot both work beautifully.
  • Orange Zest Addition: Adding a teaspoon of orange zest to the dough gives a fresh citrus brightness that pairs amazingly with the ginger.

How to Make Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe

Step 1: Make Your Own Candied Ginger (It’s Worth It!)

Start by simmering a mixture of coconut sugar and water until the sugar dissolves, then add fresh ginger coins to the syrup. Let them gently bubble for about 30–35 minutes until the liquid thickens into a syrupy glaze. This candied ginger isn’t just for the cookies—it’s such a treat on its own or stirred into tea. Toss the cooled ginger slices in extra coconut sugar to dry and store them in the fridge. Pro tip: making this a day or two ahead lets the flavors develop beautifully.

Step 2: Prepare Your Cookie Dough

Preheat your oven to 350°F and line two baking sheets with parchment paper. In a big bowl, whisk together all your dry ingredients—oat flour, almond flour, spices, baking powder, salt, and coconut sugar. Then mix in the melted coconut oil and molasses until a moist dough forms. I like to use my hands here because you get a good feel for the texture. It should stick together but not be overly wet. If it feels too dry, a splash of plant milk can help—but usually, the molasses and oil do their job nicely.

Step 3: Shape and Chill the Cookies

Divide the dough into 14 equal parts—rolling them into balls is the most fun part! Place them spaced out on the baking sheets, then press your thumb firmly into the center of each ball to make a deep well. Don’t worry if the edges crack a little; gently pinch them back together. Pop the trays into the freezer for 15 minutes before baking—this chill step helps the cookies hold their shape and prevents the indentations from disappearing in the oven.

Step 4: Bake and Maintain Those Thumbprints

Bake your cookies for 14 minutes, but here’s a tip: check them around 10 minutes in. If the thumbprints are filling up a bit too much, quickly press the centers down with a teaspoon and pop them back in. When you pull them out of the oven, press the centers one last time as they cool—they won’t be difficult to indent, and this step guarantees a perfect hollow for the ganache.

Step 5: Whip Up the Chocolate Ganache Filling

Warm the coconut cream gently in a small saucepan until it’s just simmering around the edges. Remove from heat and add the chopped dark chocolate, stirring until the mixture is silky smooth. Spoon the luscious ganache into each thumbprint well, then top each cookie with one piece of your homemade candied ginger. Let the cookies set at room temperature or pop them in the fridge for about 20 minutes to speed things up. I promise, waiting for that chocolate to set is so worthwhile!

Step 6: Storing Your Cookies

Once the ganache has set, transfer the cookies to a covered container and refrigerate. They keep wonderfully for 2 to 3 days, but honestly, mine rarely last that long! If you do want to store them further or gift them, just let them come back to room temp so the ganache softens slightly before serving.

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Pro Tips for Making Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe

  • Chill That Dough: Freezing the shaped dough before baking really helps maintain those thumbprint indentations perfectly.
  • Watch Baking Time Closely: I learned the hard way that overbaking dries out the cookies and closes the centers, so keep a close eye after 10 minutes.
  • Use Refined Coconut Oil: This keeps the flavor neutral so the spices and chocolate shine without coconut overpowering.
  • Press Thumbprints When Warm: If you miss the oven check, you can press the thumbprints right after baking while cookies cool—they’re still malleable.

How to Serve Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe

A stack of four brown chocolate cookies sits on a white plate with a thin gold rim, placed on a white marbled surface. The top cookie is bitten to show a soft, melted dark chocolate center with a slightly rough texture. Each cookie is drizzled with thin lines of melted chocolate and sprinkled with a few coarse grains of white salt, giving a textured look to their surfaces. Around the plate, a few more similar cookies lie scattered, blurred softly in the background. Photo taken with an iphone --ar 4:5 --v 7

Garnishes

I usually stick with the candied ginger piece topping because it adds that lovely zesty bite and a bit of crunch. Sometimes, I dust the cookies lightly with powdered sugar or sprinkle extra cinnamon over the ganache for a festive touch. A little sea salt flakes on top of the ganache can also balance the sweetness beautifully if you’re into that salty-sweet combo.

Side Dishes

These cookies pair wonderfully with a warm cup of chai tea or your favorite vegan hot chocolate—both bring out the ginger and spice notes perfectly. For holiday gatherings, I like to offer vegan eggnog or almond milk lattes alongside, creating an irresistible cookie platter that everyone raves about.

Creative Ways to Present

For special occasions, I arrange these cookies on a tiered tray surrounded by fresh cranberries and festive greenery. Wrapping a few in clear cellophane tied with twine makes a beautiful homemade gift. I’ve also laid them out on gingerbread-scented napkins at parties to add an extra cozy vibe. Presentation really uplifts the experience!

Make Ahead and Storage

Storing Leftovers

I store leftover cookies in an airtight container in the fridge. The chocolate ganache stays firm, and the cookies maintain their tender crumb. When I want one later, I let it sit at room temperature for about 20 minutes before enjoying, so the ganache softens just right.

Freezing

I’ve successfully frozen baked cookies without ganache—just bake, cool, then freeze in a single layer on a tray before transferring to a freezer bag. When ready to eat, thaw at room temperature and add freshly made ganache if you like, or just enjoy as is. Candied ginger and dough freeze well, so you can even freeze dough balls for quick baking later.

Reheating

To revive chilled or frozen cookies, I gently warm them in a 300°F oven for about 5 minutes or microwave for 15 seconds. This softens the cookie and ganache without melting the chocolate into a mess. Just keep an eye so you don’t overheat them!

FAQs

  1. Can I use a different type of flour for this Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe?

    Absolutely! While I recommend oat flour and almond flour for the best texture and flavor, you can substitute with other gluten-free flours like rice flour or a gluten-free blend. Just keep in mind the moisture content might vary, so you might need to adjust slightly with an extra teaspoon or two of liquid or flour to get the dough consistency right.

  2. What can I do if I don’t have fresh ginger for the candied ginger?

    If fresh ginger isn’t available, you can skip the homemade candied ginger and substitute with store-bought vegan candied ginger or crystallized ginger pieces. It won’t have quite the same fresh zing but will still add great flavor. Another option is to finely chop crystallized ginger and mix it into the dough itself for a surprise pop.

  3. Can I make these cookies gluten-free?

    Yes! Using oat flour and almond flour is naturally gluten-free, but ensure your oat flour is certified gluten-free to avoid any cross-contamination. These flours create a tender, soft cookie perfect for gluten-free needs.

  4. How long can I store these cookies?

    Stored in an airtight container in the fridge, these cookies stay fresh for 2 to 3 days. Beyond that, they may start to dry out or lose the best texture. For longer storage, freezing is your best bet.

  5. Is blackstrap molasses necessary?

    Blackstrap molasses adds that deep, robust flavor characteristic of gingerbread. While you can substitute with regular molasses or dark corn syrup, the flavor profile won’t be quite as rich. If you don’t have blackstrap, regular molasses is a fine stand-in.

Final Thoughts

Honestly, this Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe has become a staple in my kitchen during cooler months—and now I’m excited to share it with you like a treasured family secret. It’s approachable, rewarding, and full of flavor that feels special yet comforting. I hope you enjoy making and sharing these cookies as much as I do. They’re perfect for cozy moments, thoughtful gifts, or simply treating yourself to a little festive joy. Grab your ingredients, invite a friend or two to join in, and let’s bake some magic happen!

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Vegan Dark Chocolate-Gingerbread Thumbprint Cookies Recipe

5 Stars 4 Stars 3 Stars 2 Stars 1 Star 4.8 from 68 reviews
  • Author: Wesley
  • Prep Time: 30 minutes
  • Cook Time: 50 minutes
  • Total Time: 1 hour 20 minutes
  • Yield: 14 large cookies
  • Category: Dessert
  • Method: Baking
  • Cuisine: Vegan, American
  • Diet: Vegan

Description

These Vegan Dark Chocolate-Gingerbread Thumbprint Cookies combine the warm spices of gingerbread with rich dark chocolate and a delightful tang of candied ginger. Made with oat and almond flours for a tender texture and naturally sweetened with coconut sugar and molasses, these cookies are perfect for a festive treat that is completely plant-based and gluten-free. The chocolate ganache filling adds a decadent finish, while the candied ginger on top provides a spicy-sweet bite.


Ingredients

Candied Ginger

  • 1 cup coconut sugar, plus 3 tablespoons
  • 2 cups water
  • 1 3–inch piece of ginger, peeled and sliced into coins about 1/8-inch thick

Cookies & Chocolate Ganache

  • 1 1/2 cups oat flour (180 grams)
  • 1/2 cup super-fine almond flour (68 grams)
  • 1/2 cup coconut sugar (72 grams)
  • 1 teaspoon baking powder (4 grams)
  • 2 teaspoons ground cinnamon (6 grams)
  • 1 tablespoon ground ginger (7 grams)
  • 1/4 teaspoon ground nutmeg (1 gram)
  • 1/4 teaspoon ground cloves (1 gram)
  • 3/4 teaspoon kosher salt (3 grams)
  • 7 tablespoons refined coconut oil, melted (77 grams)
  • 6 tablespoons blackstrap molasses (132 grams)
  • 4.2 ounces Hu Simple Dark Chocolate (2 bars), roughly chopped into shards
  • 3 tablespoons unsweetened coconut cream


Instructions

  1. Make the candied ginger: Combine 1 cup coconut sugar with 2 cups water in a small saucepan, and heat over medium-low flame, stirring occasionally until the sugar dissolves. Add the ginger coins and simmer for 30 to 35 minutes, stirring every few minutes, until the syrup thickens. Drain the ginger pieces, toss them in 3 tablespoons of coconut sugar, and refrigerate to cool and dry. Reserve syrup if desired.
  2. Prepare baking sheets and oven: Preheat the oven to 350°F (175°C). Line two baking sheets with parchment paper.
  3. Mix dry ingredients: In a large bowl, whisk together oat flour, almond flour, coconut sugar, baking powder, cinnamon, ground ginger, nutmeg, cloves, and salt until evenly combined.
  4. Form the dough: Add melted coconut oil and blackstrap molasses to the dry mix. Combine using your hands or a wooden spoon until a moist dough ball forms.
  5. Shape cookies: Divide the dough into 14 equal pieces and roll each into a ball. Place them on prepared baking sheets spaced evenly. Use your thumb to create a deep indentation in the center of each cookie, nearly down to the sheet but not breaking through. Pinch edges if cracks form to maintain the thumbprint shape.
  6. Chill and bake: Freeze the cookie sheets for 15 minutes. Bake in the preheated oven for 14 minutes, checking at 10 minutes. If indentations fill in, gently press them with a teaspoon. After baking, press centers again as cookies cool on the tray.
  7. Prepare chocolate ganache: Heat coconut cream in a small saucepan until just simmering at the edges. Remove from heat and stir in chopped dark chocolate until melted and smooth.
  8. Fill cookies: Spoon the chocolate ganache into the thumbprints on each cookie. Top each with one piece of candied ginger. Let stand at room temperature or chill for 20 minutes until ganache sets.
  9. Store: Keep cookies in a covered container in the refrigerator for up to 3 days to maintain freshness.

Notes

  • Candied ginger can be made several days in advance and stored in the refrigerator covered.
  • If the dough cracks when making thumbprints, pinch the edges gently to seal and retain shape.
  • Use a refined coconut oil to avoid strong coconut flavor if preferred.
  • Reserve the syrup from candied ginger for use as a sweetener in cocktails or other recipes.
  • Cookies are best enjoyed within 2 to 3 days for optimal texture and flavor.

Nutrition

  • Serving Size: 1 cookie
  • Calories: 185
  • Sugar: 12g
  • Sodium: 90mg
  • Fat: 9g
  • Saturated Fat: 6g
  • Unsaturated Fat: 3g
  • Trans Fat: 0g
  • Carbohydrates: 24g
  • Fiber: 3g
  • Protein: 2g
  • Cholesterol: 0mg

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